STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711875_03676Unannotated protein. (295 aa)    
Predicted Functional Partners:
GCA_000711875_03675
Unannotated protein.
 
 
 0.998
GCA_000711875_00798
Unannotated protein.
  
 
 0.982
GCA_000711875_03677
Unannotated protein.
 
   
 0.966
GCA_000711875_01200
Unannotated protein.
    
   0.706
GCA_000711875_01032
Unannotated protein.
    
   0.665
GCA_000711875_01084
Unannotated protein.
    
   0.665
GCA_000711875_01220
Unannotated protein.
    
   0.665
GCA_000711875_02815
Unannotated protein.
    
   0.633
GCA_000711875_02619
Unannotated protein.
   
    0.412
GCA_000711875_01495
Unannotated protein.
   
 
 0.400
Your Current Organism:
Andreprevotia chitinilytica
NCBI taxonomy Id: 1120999
Other names: A. chitinilytica DSM 18519, Andreprevotia chitinilytica DSM 18519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.