STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429585_02106Unannotated protein. (167 aa)    
Predicted Functional Partners:
GCA_000429585_02105
Unannotated protein.
       0.773
GCA_000429585_01305
Unannotated protein.
   
 0.604
GCA_000429585_00636
Unannotated protein.
  
 
 0.573
GCA_000429585_02104
Unannotated protein.
     
 0.569
GCA_000429585_00363
Unannotated protein.
  
 
0.551
GCA_000429585_00649
Unannotated protein.
  
 
  0.515
GCA_000429585_00650
Unannotated protein.
  
 
 0.485
GCA_000429585_02107
Unannotated protein.
  
    0.415
GCA_000429585_01833
Unannotated protein.
     
 0.414
GCA_000429585_02038
Unannotated protein.
     
 0.414
Your Current Organism:
Atopococcus tabaci
NCBI taxonomy Id: 1121024
Other names: A. tabaci DSM 17538, Atopococcus tabaci DSM 17538
Server load: low (30%) [HD]