STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620125_00123Unannotated protein. (271 aa)    
Predicted Functional Partners:
GCA_000620125_00124
Unannotated protein.
 
   0.950
GCA_000620125_00127
Unannotated protein.
 
    0.917
GCA_000620125_01981
Unannotated protein.
 
  
 0.903
GCA_000620125_00126
Unannotated protein.
  
    0.815
GCA_000620125_00125
Unannotated protein.
  
  
 0.803
GCA_000620125_00110
Unannotated protein.
      0.785
GCA_000620125_00119
Unannotated protein.
 
    0.782
GCA_000620125_00155
Unannotated protein.
      0.759
GCA_000620125_00390
Unannotated protein.
   
   0.745
GCA_000620125_01958
Unannotated protein.
    
   0.741
Your Current Organism:
Clostridiisalibacter paucivorans
NCBI taxonomy Id: 1121289
Other names: C. paucivorans DSM 22131, Clostridiisalibacter paucivorans DSM 22131
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.