STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ98817.1Putative tricarboxylic transport membrane protein. (499 aa)    
Predicted Functional Partners:
SHJ98779.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
  
 0.941
SHJ53139.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
 0.900
SHK05693.1
Putative tricarboxylic transport membrane protein.
 
  
 0.897
SHJ98838.1
Predicted dehydrogenase.
       0.773
SHJ53168.1
Putative tricarboxylic transport membrane protein.
  
 
 0.760
SHJ98795.1
Tripartite tricarboxylate transporter TctB family protein.
       0.720
SHJ98854.1
Predicted dehydrogenase.
       0.709
SHJ98875.1
Sugar phosphate isomerase/epimerase.
       0.629
SHK05715.1
Putative tricarboxylic transport membrane protein.
 
     0.474
SHJ98758.1
Transcriptional regulator, LacI family.
       0.444
Your Current Organism:
Paramaledivibacter caminithermalis
NCBI taxonomy Id: 1121301
Other names: Clostridium caminithermale DSM 15212, P. caminithermalis DSM 15212, Paramaledivibacter caminithermalis DSM 15212
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.