STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK20159.1Two-component system, sensor histidine kinase YcbA. (426 aa)    
Predicted Functional Partners:
SHK20176.1
Two-component system, response regulator YcbB.
 
 
  0.955
SHJ93495.1
PAS domain S-box-containing protein.
 
 
 0.950
SHK28710.1
Two-component system, response regulator YcbB.
 
 0.933
SHJ97655.1
Signal transduction histidine kinase.
 
 0.911
SHK45476.1
Two-component system, response regulator YcbB.
 
 
  0.905
SHK58255.1
Two-component system, response regulator YcbB.
 
 
 0.900
SHK24412.1
Two-component system, response regulator YcbB.
 
 
 0.898
SHJ48410.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
0.846
SHK15504.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.800
SHK62091.1
HDIG domain-containing protein.
  
 0.758
Your Current Organism:
Paramaledivibacter caminithermalis
NCBI taxonomy Id: 1121301
Other names: Clostridium caminithermale DSM 15212, P. caminithermalis DSM 15212, Paramaledivibacter caminithermalis DSM 15212
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.