STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK22118.1Formylmethanofuran dehydrogenase subunit E. (175 aa)    
Predicted Functional Partners:
SHK02664.1
tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA.
  
  0.869
SHJ69808.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.855
SHK10933.1
Fe-S-cluster-containing dehydrogenase component.
 
  
  0.836
SHK47047.1
Formate dehydrogenase major subunit.
   
 
  0.812
SHK22138.1
Peptide/nickel transport system substrate-binding protein.
 
     0.811
SHJ62978.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
    
  0.785
SHK22201.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     0.727
SHK22183.1
Peptide/nickel transport system permease protein.
 
     0.724
SHK22152.1
Peptide/nickel transport system permease protein.
 
     0.716
SHJ55437.1
Alcohol dehydrogenase, class IV.
   
 
  0.665
Your Current Organism:
Paramaledivibacter caminithermalis
NCBI taxonomy Id: 1121301
Other names: Clostridium caminithermale DSM 15212, P. caminithermalis DSM 15212, Paramaledivibacter caminithermalis DSM 15212
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.