STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG84937.1Stress response protein SCP2. (209 aa)    
Predicted Functional Partners:
SHG84867.1
Putative component of 'biosynthetic module'.
 
    0.914
SHG84845.1
Uncharacterized conserved protein YaaN involved in tellurite resistance; Belongs to the TelA family.
 
  
 0.912
SHG84981.1
Tellurium resistance protein TerD.
 
   
0.884
SHG84814.1
Citrate lyase beta subunit.
 
     0.879
SHG84780.1
PELOTA RNA binding domain-containing protein.
 
     0.876
SHG84742.1
Hydroxymethylpyrimidine pyrophosphatase.
 
     0.857
SHG84905.1
Ca2+-transporting ATPase.
       0.801
SHH08945.1
Uncharacterized conserved protein, AIM24 family.
 
     0.616
SHG85013.1
Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
       0.424
Your Current Organism:
Asaccharospora irregularis
NCBI taxonomy Id: 1121321
Other names: A. irregularis DSM 2635, Asaccharospora irregularis DSM 2635, Clostridium irregulare DSM 2635
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