STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
celYExoglucanase-2. (914 aa)    
Predicted Functional Partners:
celZ
Endoglucanase Z.
 
 
 
0.952
xynB
Endo-1,4-beta-xylanase XynB.
 
   
 0.766
xynA
Endo-1,4-beta-xylanase A; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
   
 0.763
AGC67759.1
Endo-alpha-xylanase.
  
   
 0.697
AGC67127.1
alpha-1,2-L-fucosidase.
 
 
 0.664
xynC1
Endo-1,4-beta-xylanase.
 
   
 0.638
xyl
beta-D-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
   
 0.630
AGC67515.1
Glucoside hyrolase family10.
  
   
 0.597
manA1
Mannan endo-1,4-beta-mannosidase ManA; Belongs to the glycosyl hydrolase 26 family.
 
  
 0.595
AGC67612.1
Peptidase M42 family protein.
   
  
 0.546
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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