STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGC68479.1Hypothetical protein. (64 aa)    
Predicted Functional Partners:
pilZ
Type IV pilus assembly PilZ.
  
     0.618
AGC67296.1
Hypothetical protein.
  
     0.611
dnaE
DNA polymerase III subunit alpha.
       0.602
ytxC
Sporulation protein YtxC.
  
     0.597
pfkA
6-phosphofructokinase PfkA; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
       0.579
AGC68477.1
Thioesterase superfamily protein.
       0.575
bofA
pro-sigmaK processing inhibitor BofA.
  
     0.562
AGC67168.1
O-antigen polymerase.
  
     0.504
AGC69667.1
Activator of (R)-2-hydroxyglutaryl-CoA dehydratase.
  
     0.491
ComFB
Hypothetical protein.
 
     0.486
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.