STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620145_01193Unannotated protein. (238 aa)    
Predicted Functional Partners:
GCA_000620145_01161
Unannotated protein.
   
 0.997
GCA_000620145_02357
Unannotated protein.
    
 0.988
GCA_000620145_00326
Unannotated protein.
    
 0.985
GCA_000620145_01715
Unannotated protein.
    
 0.984
GCA_000620145_00688
Unannotated protein.
   
  0.983
GCA_000620145_01040
Unannotated protein.
 
 
  0.972
GCA_000620145_01791
Unannotated protein.
  
  0.969
GCA_000620145_01790
Unannotated protein.
   
 0.953
GCA_000620145_01096
Unannotated protein.
    
 0.950
GCA_000620145_02805
Unannotated protein.
  
 
   0.905
Your Current Organism:
Deefgea rivuli
NCBI taxonomy Id: 1121375
Other names: D. rivuli DSM 18356, Deefgea rivuli DSM 18356
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.