STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429885_01043Unannotated protein. (165 aa)    
Predicted Functional Partners:
GCA_000429885_01997
Unannotated protein.
  
     0.711
GCA_000429885_01220
Unannotated protein.
  
     0.703
thiL
Unannotated protein; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
       0.699
aioB
Unannotated protein.
  
     0.697
GCA_000429885_00339
Unannotated protein.
  
     0.679
GCA_000429885_01914
Unannotated protein.
  
     0.672
GCA_000429885_01800
Unannotated protein.
  
     0.665
GCA_000429885_01200
Unannotated protein.
  
     0.654
GCA_000429885_00359
Unannotated protein.
  
     0.628
GCA_000429885_00098
Unannotated protein.
  
     0.615
Your Current Organism:
Dermatophilus congolensis
NCBI taxonomy Id: 1121387
Other names: D. congolensis DSM 44180 = NBRC 105199, Dermatophilus congolensis DSM 44180, Dermatophilus congolensis DSM 44180 = NBRC 105199, Dermatophilus congolensis NBRC 105199, Dermatophilus congolensis NBRC 105199 = DSM 44180
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.