STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prrUnannotated protein; Belongs to the aldehyde dehydrogenase family. (473 aa)    
Predicted Functional Partners:
gabT
Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 0.917
betA_1
Unannotated protein.
  
 
 0.917
betA_2
Unannotated protein; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
 
 
 0.917
gbsA
Unannotated protein; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.917
metH_1
Unannotated protein.
   
 0.911
fmt
Unannotated protein; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
      0.900
lgrB
Unannotated protein.
  
 
 0.482
GCA_000429885_01228
Unannotated protein.
  
  
 0.458
GCA_000429885_02104
Unannotated protein.
   
 0.449
putP
Unannotated protein; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.447
Your Current Organism:
Dermatophilus congolensis
NCBI taxonomy Id: 1121387
Other names: D. congolensis DSM 44180 = NBRC 105199, Dermatophilus congolensis DSM 44180, Dermatophilus congolensis DSM 44180 = NBRC 105199, Dermatophilus congolensis NBRC 105199, Dermatophilus congolensis NBRC 105199 = DSM 44180
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