rpsF protein (Desulfacinum hydrothermale) - STRING interaction network

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Score

rpsF

Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (136 aa)

Predicted Functional Partners:

ndk

0.999

rpsI

0.999

rpsO

0.999

rpsB

0.999

rpsP

0.999

rpsK

0.999

rpsE

0.999

rpsZ

0.999

rpsJ

0.999

rplI

0.999

Your Current Organism:

Desulfacinum hydrothermale

NCBI taxonomy Id: 1121390
Other names: D. hydrothermale DSM 13146, Desulfacinum hydrothermale DSM 13146

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ndk	rplI	SAMN02746041_00453	SAMN02746041_02664	Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.	LSU ribosomal protein L9P; Binds to the 23S rRNA.	0.971
ndk	rpsB	SAMN02746041_00453	SAMN02746041_02220	Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.	SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.	0.999
ndk	rpsE	SAMN02746041_00453	SAMN02746041_02546	Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.	SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.998
ndk	rpsF	SAMN02746041_00453	SAMN02746041_02667	Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.	Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.999
ndk	rpsI	SAMN02746041_00453	SAMN02746041_00582	Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.998
ndk	rpsJ	SAMN02746041_00453	SAMN02746041_02564	Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.	SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.999
ndk	rpsK	SAMN02746041_00453	SAMN02746041_02538	Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.	SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.999
ndk	rpsO	SAMN02746041_00453	SAMN02746041_00911	Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.	SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.999
ndk	rpsP	SAMN02746041_00453	SAMN02746041_02440	Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.998
ndk	rpsZ	SAMN02746041_00453	SAMN02746041_02550	Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.	SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.998
rplI	ndk	SAMN02746041_02664	SAMN02746041_00453	LSU ribosomal protein L9P; Binds to the 23S rRNA.	Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.	0.971
rplI	rpsB	SAMN02746041_02664	SAMN02746041_02220	LSU ribosomal protein L9P; Binds to the 23S rRNA.	SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.	0.997
rplI	rpsE	SAMN02746041_02664	SAMN02746041_02546	LSU ribosomal protein L9P; Binds to the 23S rRNA.	SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.996
rplI	rpsF	SAMN02746041_02664	SAMN02746041_02667	LSU ribosomal protein L9P; Binds to the 23S rRNA.	Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.999
rplI	rpsI	SAMN02746041_02664	SAMN02746041_00582	LSU ribosomal protein L9P; Binds to the 23S rRNA.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.998
rplI	rpsJ	SAMN02746041_02664	SAMN02746041_02564	LSU ribosomal protein L9P; Binds to the 23S rRNA.	SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.997
rplI	rpsK	SAMN02746041_02664	SAMN02746041_02538	LSU ribosomal protein L9P; Binds to the 23S rRNA.	SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.997
rplI	rpsO	SAMN02746041_02664	SAMN02746041_00911	LSU ribosomal protein L9P; Binds to the 23S rRNA.	SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.995
rplI	rpsP	SAMN02746041_02664	SAMN02746041_02440	LSU ribosomal protein L9P; Binds to the 23S rRNA.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.997
rplI	rpsZ	SAMN02746041_02664	SAMN02746041_02550	LSU ribosomal protein L9P; Binds to the 23S rRNA.	SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.996