STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000519125_01110Unannotated protein. (465 aa)    
Predicted Functional Partners:
GCA_000519125_01111
Unannotated protein.
 
 
 0.934
GCA_000519125_01109
Unannotated protein.
 
    0.889
GCA_000519125_01113
Unannotated protein.
 
   
 0.884
GCA_000519125_01115
Unannotated protein.
 
  
 0.884
GCA_000519125_02296
Unannotated protein.
 
 0.882
GCA_000519125_01114
Unannotated protein.
 
 
  0.861
GCA_000519125_00678
Unannotated protein.
 
 
 0.836
GCA_000519125_01388
Unannotated protein.
 
 
 0.836
GCA_000519125_01106
Unannotated protein.
 
     0.812
GCA_000519125_02289
Unannotated protein.
  
 
 0.808
Your Current Organism:
Desulfocurvus vexinensis
NCBI taxonomy Id: 1121406
Other names: D. vexinensis DSM 17965, Desulfocurvus vexinensis DSM 17965, Desulfovibrio sp. AS36, Desulfovibrio sp. VNs36, delta proteobacterium VNs36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.