STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO44169.1Hypothetical protein. (122 aa)    
Predicted Functional Partners:
SHO44157.1
Putative baseplate assembly protein.
 
 
 0.998
SHO44162.1
Hypothetical protein.
 
   0.997
SHO44167.1
Hypothetical protein.
 
   0.997
SHO44185.1
Hypothetical protein.
 
 
 0.997
SHO44183.1
Conserved hypothetical phage tail region protein.
 
   0.994
SHO44155.1
Putative baseplate assembly protein.
 
 
 0.969
SHO44166.1
Hypothetical protein.
 
    0.953
SHO44170.1
Hypothetical protein.
 
     0.952
SHO51967.1
Type IV pilus assembly protein PilQ.
   
 
 0.952
SHO44153.1
Hypothetical protein.
 
     0.947
Your Current Organism:
Desulfopila aestuarii
NCBI taxonomy Id: 1121416
Other names: D. aestuarii DSM 18488, Desulfopila aestuarii DSM 18488
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.