STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO48190.1Cytosine/adenosine deaminase. (451 aa)    
Predicted Functional Partners:
mtaD
5-methylthioadenosine/S-adenosylhomocysteine deaminase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.
  
  
 
0.756
SHO43225.1
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
 
  
 0.748
SHO49084.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
 
 0.742
SHO47029.1
Glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase.
  
 
 0.726
SHO48866.1
NADPH-dependent glutamate synthase beta chain.
  
 
 0.698
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
  0.690
SHO43061.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreA.
  
 
 0.687
SHO47892.1
Spermidine synthase.
   
  0.682
SHO48490.1
NADPH-dependent glutamate synthase beta chain.
  
 
  0.673
SHO49083.1
Carbon-monoxide dehydrogenase small subunit.
 
 
 0.673
Your Current Organism:
Desulfopila aestuarii
NCBI taxonomy Id: 1121416
Other names: D. aestuarii DSM 18488, Desulfopila aestuarii DSM 18488
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