STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO49642.12-oxoglutarate ferredoxin oxidoreductase, beta subunit. (269 aa)    
Predicted Functional Partners:
SHO48489.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 0.999
SHO44394.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.997
SHO49643.1
2-oxoglutarate ferredoxin oxidoreductase, alpha subunit.
 0.996
SHO49641.1
2-oxoglutarate ferredoxin oxidoreductase, gamma subunit.
 0.993
SHO52547.1
Pyruvate ferredoxin oxidoreductase gamma subunit.
  
 0.993
SHO47541.1
2-oxoglutarate ferredoxin oxidoreductase subunit gamma.
 0.989
SHO50179.1
2-oxoglutarate ferredoxin oxidoreductase, alpha subunit.
 0.984
SHO50176.1
2-oxoglutarate ferredoxin oxidoreductase, gamma subunit.
 0.980
SHO44839.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 0.978
SHO47545.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 
 0.975
Your Current Organism:
Desulfopila aestuarii
NCBI taxonomy Id: 1121416
Other names: D. aestuarii DSM 18488, Desulfopila aestuarii DSM 18488
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.