rnhA-2 protein (Desulfopila aestuarii) - STRING interaction network

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Score

rnhA-2

Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (307 aa)

Predicted Functional Partners:

rnhB

0.902

polA

0.880

SHO46893.1

0.819

SHO53466.1

0.809

SHO51690.1

0.783

SHO50704.1

0.764

SHO44394.1

0.743

rnhA

0.677

SHO50128.1

0.660

SHO42978.1

0.651

Your Current Organism:

Desulfopila aestuarii

NCBI taxonomy Id: 1121416
Other names: D. aestuarii DSM 18488, Desulfopila aestuarii DSM 18488

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SHO42978.1	SHO46893.1	SAMN02745220_00238	SAMN02745220_01682	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	Single-strand binding protein.	0.565
SHO42978.1	SHO51690.1	SAMN02745220_00238	SAMN02745220_04163	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	UvrD-like helicase C-terminal domain-containing protein.	0.992
SHO42978.1	SHO53466.1	SAMN02745220_00238	SAMN02745220_05132	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	Single-strand binding protein.	0.529
SHO42978.1	polA	SAMN02745220_00238	SAMN02745220_00993	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.999
SHO42978.1	rnhA	SAMN02745220_00238	SAMN02745220_02347	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.654
SHO42978.1	rnhA-2	SAMN02745220_00238	SAMN02745220_03530	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.651
SHO42978.1	rnhB	SAMN02745220_00238	SAMN02745220_03800	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.977
SHO44394.1	rnhA	SAMN02745220_00728	SAMN02745220_02347	Pyruvate-ferredoxin/flavodoxin oxidoreductase.	RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.752
SHO44394.1	rnhA-2	SAMN02745220_00728	SAMN02745220_03530	Pyruvate-ferredoxin/flavodoxin oxidoreductase.	Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.743
SHO44394.1	rnhB	SAMN02745220_00728	SAMN02745220_03800	Pyruvate-ferredoxin/flavodoxin oxidoreductase.	RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.643
SHO46893.1	SHO42978.1	SAMN02745220_01682	SAMN02745220_00238	Single-strand binding protein.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.565
SHO46893.1	SHO51690.1	SAMN02745220_01682	SAMN02745220_04163	Single-strand binding protein.	UvrD-like helicase C-terminal domain-containing protein.	0.803
SHO46893.1	polA	SAMN02745220_01682	SAMN02745220_00993	Single-strand binding protein.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.682
SHO46893.1	rnhA	SAMN02745220_01682	SAMN02745220_02347	Single-strand binding protein.	RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.811
SHO46893.1	rnhA-2	SAMN02745220_01682	SAMN02745220_03530	Single-strand binding protein.	Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.819
SHO50128.1	rnhA	SAMN02745220_03269	SAMN02745220_02347	Alpha-ribazole phosphatase; Belongs to the phosphoglycerate mutase family.	RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.605
SHO50128.1	rnhA-2	SAMN02745220_03269	SAMN02745220_03530	Alpha-ribazole phosphatase; Belongs to the phosphoglycerate mutase family.	Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.660
SHO50704.1	rnhA	SAMN02745220_03602	SAMN02745220_02347	Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.	RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.679
SHO50704.1	rnhA-2	SAMN02745220_03602	SAMN02745220_03530	Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.	Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.764
SHO51690.1	SHO42978.1	SAMN02745220_04163	SAMN02745220_00238	UvrD-like helicase C-terminal domain-containing protein.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.992