STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO52830.1Hypothetical protein. (819 aa)    
Predicted Functional Partners:
SHO45043.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
   
 
 0.940
SHO49074.1
Iron complex outermembrane recepter protein.
    
 
 0.928
SHO52855.1
Phage conserved hypothetical protein, phiE125 gp8 family.
  
 0.906
SHO52840.1
Hypothetical protein.
     
 0.794
SHO52827.1
Hypothetical protein.
       0.773
SHO52828.1
Putative phage tail protein.
       0.773
SHO52829.1
Hypothetical protein.
       0.773
SHO52832.1
Hypothetical protein.
       0.773
SHO52833.1
Hypothetical protein.
       0.773
SHO52835.1
Hypothetical protein.
       0.773
Your Current Organism:
Desulfopila aestuarii
NCBI taxonomy Id: 1121416
Other names: D. aestuarii DSM 18488, Desulfopila aestuarii DSM 18488
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.