STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO53085.1Tripartite tricarboxylate transporter TctB family protein. (156 aa)    
Predicted Functional Partners:
SHO53084.1
Putative tricarboxylic transport membrane protein.
  
 
 0.914
SHO53082.1
Tripartite tricarboxylate transporter family receptor.
  
  
 0.798
SHO49638.1
Putative tricarboxylic transport membrane protein.
  
 
 0.637
SHO50872.1
Putative tricarboxylic transport membrane protein.
  
 
 0.637
SHO51232.1
Putative tricarboxylic transport membrane protein.
  
 
 0.637
SHO53088.1
Tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase.
       0.631
SHO49640.1
Putative tricarboxylic transport membrane protein.
  
  
 0.572
SHO50867.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
  
 0.572
SHO51229.1
Putative tricarboxylic transport membrane protein.
  
  
 0.572
SHO49637.1
Hypothetical protein.
  
    0.466
Your Current Organism:
Desulfopila aestuarii
NCBI taxonomy Id: 1121416
Other names: D. aestuarii DSM 18488, Desulfopila aestuarii DSM 18488
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.