STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO53381.1Methyl-accepting chemotaxis protein. (662 aa)    
Predicted Functional Partners:
SHO49818.1
CheB methylesterase.
  
 0.967
SHO53059.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.949
SHO50683.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.929
SHO50274.1
Chemotaxis protein histidine kinase CheA.
  
 0.905
SHO47739.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.902
SHO44553.1
Response regulator receiver domain-containing protein.
  
 0.889
SHO53385.1
CheA signal transduction histidine kinase.
 
 0.876
SHO43480.1
PAS domain S-box-containing protein.
  
 0.860
SHO48555.1
His Kinase A (phospho-acceptor) domain-containing protein.
  
 0.860
SHO53387.1
CheW protein.
 
 0.849
Your Current Organism:
Desulfopila aestuarii
NCBI taxonomy Id: 1121416
Other names: D. aestuarii DSM 18488, Desulfopila aestuarii DSM 18488
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