STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO53885.1Methyl-accepting chemotaxis protein. (809 aa)    
Predicted Functional Partners:
SHO53884.1
Methyl-accepting chemotaxis protein (MCP) signalling domain-containing protein.
     0.976
SHO50683.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.973
SHO49818.1
CheB methylesterase.
 
 0.972
SHO50274.1
Chemotaxis protein histidine kinase CheA.
 
 0.968
SHO43465.1
CheA signal transduction histidine kinase.
 
 0.964
SHO53385.1
CheA signal transduction histidine kinase.
 
 0.964
SHO53059.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 0.962
SHO47739.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 0.933
SHO50685.1
CheW protein.
 
 0.933
SHO43451.1
MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 0.910
Your Current Organism:
Desulfopila aestuarii
NCBI taxonomy Id: 1121416
Other names: D. aestuarii DSM 18488, Desulfopila aestuarii DSM 18488
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