STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_2388PFAM: sodium/sulfate symporter; KEGG: dak:DaAHT2_2515 citrate transporter. (493 aa)    
Predicted Functional Partners:
dsat_2387
PFAM: CBS domain containing protein; KEGG: dsa:Desal_3507 CBS domain containing protein.
 
     0.848
dsat_1482
PFAM: CBS domain containing protein; KEGG: dsa:Desal_3507 CBS domain containing protein.
  
     0.667
dsat_2568
PFAM: histidine kinase A domain protein; KEGG: dol:Dole_2332 histidine kinase A domain-containing protein.
  
     0.663
dsat_0560
PFAM: CBS domain containing protein; KEGG: dba:Dbac_2040 CBS domain-containing protein.
  
     0.657
dsat_1638
KEGG: dsa:Desal_2372 hypothetical protein.
  
     0.633
dsat_0554
PFAM: CBS domain containing protein; KEGG: dba:Dbac_2040 CBS domain-containing protein.
  
     0.628
dsat_2570
Integral membrane sensor signal transduction histidine kinase; KEGG: das:Daes_0065 ATPase ATP-binding domain-containing protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein.
  
     0.627
dsat_0549
PFAM: CBS domain containing protein; KEGG: dba:Dbac_2040 CBS domain-containing protein.
  
     0.626
dsat_1639
PFAM: protein of unknown function DUF81; KEGG: dvl:Dvul_2726 hypothetical protein.
  
     0.618
dsat_2571
KEGG: dat:HRM2_40350 response regulator receiver domain protein; PFAM: response regulator receiver, Cytidylate kinase-like family; SMART: response regulator receiver.
  
     0.604
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.