STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378465_01502Unannotated protein. (166 aa)    
Predicted Functional Partners:
GCA_000378465_01503
Unannotated protein.
 
 
  0.951
GCA_000378465_01501
Unannotated protein.
 
  0.935
GCA_000378465_03585
Unannotated protein.
  
  
  0.732
GCA_000378465_00331
Unannotated protein.
  
 
  0.729
GCA_000378465_03074
Unannotated protein.
  
     0.669
GCA_000378465_00330
Unannotated protein.
  
     0.668
GCA_000378465_02960
Unannotated protein.
  
  
  0.664
GCA_000378465_00329
Unannotated protein.
 
  0.619
GCA_000378465_00875
Unannotated protein.
  
 
  0.548
GCA_000378465_02957
Unannotated protein.
  
 
  0.521
Your Current Organism:
Elioraea tepidiphila
NCBI taxonomy Id: 1121861
Other names: E. tepidiphila DSM 17972, Elioraea tepidiphila DSM 17972, Elioraea tepidiphila TU-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.