STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsA2Arsenical pump-driving ATPase. (361 aa)    
Predicted Functional Partners:
arsA1
Arsenical pump-driving ATPase.
 
 
  0.998
arsA3
Arsenical pump-driving ATPase.
 
 
 
0.970
whiD
Transcriptional regulator WhiD; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
       0.553
FEAC_02840
Polyketide cyclase / dehydrase and lipid transport.
 
     0.503
FEAC_25990
Hypothetical protein; Mycothiol maleylpyruvate isomerase N-terminal domain.
  
     0.503
yhjD
Inner membrane protein YhjD.
  
     0.473
FEAC_02160
Hypothetical protein.
    
 0.451
ubiB2
Putative protein kinase UbiB.
  
     0.448
FEAC_11200
Hypothetical protein.
  
     0.417
Your Current Organism:
Ferrimicrobium acidiphilum
NCBI taxonomy Id: 1121877
Other names: F. acidiphilum DSM 19497, Ferrimicrobium acidiphilum DSM 19497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.