STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE56361.1HlyD family secretion protein. (429 aa)    
Predicted Functional Partners:
SHE56346.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
 
 0.825
SHE66733.1
MacB-like core domain-containing protein.
 
  
 0.810
SHE52261.1
Sugar phosphate permease.
  
     0.715
SHE66843.1
Biotin-lipoyl like.
 
 
 0.709
SHE66774.1
MacB-like core domain-containing protein.
  
  
 0.704
SHE66796.1
Putative ABC transport system ATP-binding protein.
 
 
 0.689
SHE61095.1
Hypothetical protein.
  
     0.661
SHE48782.1
Cytochrome b(N-terminal)/b6/petB.
  
     0.639
SHF00983.1
Biotin-lipoyl like.
 
 
 0.633
SHF01007.1
Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
    
 0.630
Your Current Organism:
Ferrithrix thermotolerans
NCBI taxonomy Id: 1121881
Other names: F. thermotolerans DSM 19514, Ferrithrix thermotolerans DSM 19514
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