STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425645_01790Unannotated protein. (398 aa)    
Predicted Functional Partners:
GCA_000425645_01791
Unannotated protein.
       0.623
GCA_000425645_01197
Unannotated protein.
  
     0.525
GCA_000425645_00725
Unannotated protein.
  
     0.504
GCA_000425645_00709
Unannotated protein.
  
     0.470
GCA_000425645_02524
Unannotated protein.
  
     0.462
GCA_000425645_01789
Unannotated protein.
       0.406
GCA_000425645_01043
Unannotated protein.
  
     0.401
Your Current Organism:
Gaetbulibacter saemankumensis
NCBI taxonomy Id: 1121909
Other names: G. saemankumensis DSM 17032, Gaetbulibacter saemankumensis DSM 17032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.