STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000377765_00258Unannotated protein. (184 aa)    
Predicted Functional Partners:
GCA_000377765_00256
Unannotated protein.
 
 
 0.985
GCA_000377765_00257
Unannotated protein.
 
  
 0.969
GCA_000377765_00259
Unannotated protein.
 
     0.881
GCA_000377765_03478
Unannotated protein.
  
 
 0.790
GCA_000377765_03908
Unannotated protein.
  
 
 0.790
GCA_000377765_00002
Unannotated protein.
  
 
 0.769
GCA_000377765_02835
Unannotated protein.
  
 
 0.769
GCA_000377765_00003
Unannotated protein.
 
  
 0.760
GCA_000377765_02826
Unannotated protein.
   
 
 0.757
GCA_000377765_03906
Unannotated protein.
   
 
 0.757
Your Current Organism:
Gracilibacillus lacisalsi
NCBI taxonomy Id: 1121929
Other names: G. lacisalsi DSM 19029, Gracilibacillus lacisalsi BH312, Gracilibacillus lacisalsi DSM 19029, Gracilibacillus sp. BH312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.