STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000377765_00309Unannotated protein. (666 aa)    
Predicted Functional Partners:
GCA_000377765_02692
Unannotated protein.
 
0.884
GCA_000377765_01576
Unannotated protein.
 
 
 0.836
GCA_000377765_00855
Unannotated protein.
  
 
  0.726
GCA_000377765_02711
Unannotated protein.
 
 
 0.710
GCA_000377765_01930
Unannotated protein.
 
     0.708
GCA_000377765_04026
Unannotated protein.
 
   
  0.691
GCA_000377765_02594
Unannotated protein.
    
  0.686
GCA_000377765_02038
Unannotated protein.
  
 0.677
GCA_000377765_02781
Unannotated protein.
 
   
 0.663
GCA_000377765_02165
Unannotated protein.
 
 
0.596
Your Current Organism:
Gracilibacillus lacisalsi
NCBI taxonomy Id: 1121929
Other names: G. lacisalsi DSM 19029, Gracilibacillus lacisalsi BH312, Gracilibacillus lacisalsi DSM 19029, Gracilibacillus sp. BH312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.