STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423105_00699Unannotated protein. (67 aa)    
Predicted Functional Partners:
GCA_000423105_00861
Unannotated protein.
  
     0.759
GCA_000423105_01965
Unannotated protein.
  
     0.757
GCA_000423105_00833
Unannotated protein.
  
     0.749
GCA_000423105_00840
Unannotated protein.
  
     0.741
GCA_000423105_01976
Unannotated protein.
  
     0.689
GCA_000423105_00486
Unannotated protein.
  
     0.640
GCA_000423105_00278
Unannotated protein.
  
     0.613
GCA_000423105_01940
Unannotated protein.
  
     0.597
GCA_000423105_01634
Unannotated protein.
  
     0.583
GCA_000423105_01103
Unannotated protein.
  
     0.564
Your Current Organism:
Halalkalibacillus halophilus
NCBI taxonomy Id: 1121936
Other names: H. halophilus DSM 18494, Halalkalibacillus halophilus DSM 18494
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.