STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX84991.1Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (315 aa)    
Predicted Functional Partners:
SDX85017.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.999
SDX85051.1
Simple sugar transport system ATP-binding protein.
 
 0.999
SDX85080.1
Basic membrane protein A.
 
 
 0.976
SDY17608.1
Basic membrane lipoprotein Med, substrate-binding protein (PBP1-ABC) superfamily.
 
 
 0.920
SDY66348.1
Basic membrane lipoprotein Med, substrate-binding protein (PBP1-ABC) superfamily.
 
 
 0.626
SDX84964.1
Transcriptional regulator, XRE family with cupin sensor.
       0.400
Your Current Organism:
Lachnobacterium bovis
NCBI taxonomy Id: 1122142
Other names: L. bovis DSM 14045, Lachnobacterium bovis DSM 14045
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.