STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FC23_GL000795Unannotated protein; Belongs to the 5'-nucleotidase family. (521 aa)    
Predicted Functional Partners:
FC23_GL000785
Unannotated protein.
  
 
  0.933
udk
Unannotated protein.
  
 
  0.933
FC23_GL000564
Unannotated protein; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
    
  0.923
FC23_GL001314
Unannotated protein.
   
 
  0.922
FC23_GL000067
Unannotated protein.
   
 
  0.910
guaA
Unannotated protein; Catalyzes the synthesis of GMP from XMP.
     
 0.877
FC23_GL000976
Unannotated protein; Belongs to the 5'-nucleotidase family.
 
  
 
0.843
FC23_GL000080
Unannotated protein.
    
  0.749
FC23_GL000500
Unannotated protein.
 
 
 0.641
FC23_GL000793
Unannotated protein.
  
 
  0.599
Your Current Organism:
Lactobacillus psittaci
NCBI taxonomy Id: 1122152
Other names: L. psittaci DSM 15354, Lactobacillus psittaci CIP 106492, Lactobacillus psittaci DSM 15354, Lactobacillus psittaci JCM 11552, Lactobacillus psittaci LMG 21594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.