STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FC23_GL000555Unannotated protein; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. (412 aa)    
Predicted Functional Partners:
FC23_GL000556
Unannotated protein.
  
    0.826
FC23_GL000557
Unannotated protein.
  
    0.772
sigA
Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
  
    0.632
FC23_GL000209
Unannotated protein.
  
 
 0.629
FC23_GL000981
Unannotated protein; Belongs to the peptidase M24B family.
  
 
 0.624
FC23_GL000859
Unannotated protein.
     
 0.594
guaC
Unannotated protein; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides; Belongs to the IMPDH/GMPR family. GuaC type 2 subfamily.
    
 
 0.593
dnaG
Unannotated protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
     
 0.591
FC23_GL000979
Unannotated protein.
    
 0.520
glyA
Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
   
 
 0.490
Your Current Organism:
Lactobacillus psittaci
NCBI taxonomy Id: 1122152
Other names: L. psittaci DSM 15354, Lactobacillus psittaci CIP 106492, Lactobacillus psittaci DSM 15354, Lactobacillus psittaci JCM 11552, Lactobacillus psittaci LMG 21594
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.