STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FC23_GL000006Unannotated protein. (578 aa)    
Predicted Functional Partners:
FC23_GL000005
Unannotated protein.
 
 
0.999
FC23_GL000003
Unannotated protein.
  
 0.989
FC23_GL000004
Unannotated protein.
 
  
 0.983
FC23_GL000056
Unannotated protein.
 
  
 
0.920
FC23_GL000940
Unannotated protein.
 
     
0.884
FC23_GL000008
Unannotated protein.
 
   
 0.800
FC23_GL000009
Unannotated protein.
 
   
 0.779
FC23_GL000007
Unannotated protein; Belongs to the FPP/GGPP synthase family.
  
     0.736
potA
Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
     
0.573
FC23_GL000002
Unannotated protein.
       0.447
Your Current Organism:
Lactobacillus psittaci
NCBI taxonomy Id: 1122152
Other names: L. psittaci DSM 15354, Lactobacillus psittaci CIP 106492, Lactobacillus psittaci DSM 15354, Lactobacillus psittaci JCM 11552, Lactobacillus psittaci LMG 21594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.