STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FC23_GL000333Unannotated protein. (380 aa)    
Predicted Functional Partners:
FC23_GL000335
Unannotated protein.
 0.995
FC23_GL000334
Unannotated protein.
 
 
 0.990
FC23_GL000332
Unannotated protein; Belongs to the CoA-transferase III family.
 
 0.962
FC23_GL000336
Unannotated protein.
 
 0.959
FC23_GL000314
Unannotated protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.932
FC23_GL000089
Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.928
FC23_GL000162
Unannotated protein.
 
 
 0.909
FC23_GL000371
Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
 0.889
FC23_GL000337
Unannotated protein.
 
  
 0.852
ribB
Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
    
  0.843
Your Current Organism:
Lactobacillus psittaci
NCBI taxonomy Id: 1122152
Other names: L. psittaci DSM 15354, Lactobacillus psittaci CIP 106492, Lactobacillus psittaci DSM 15354, Lactobacillus psittaci JCM 11552, Lactobacillus psittaci LMG 21594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.