STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000376945_00566Unannotated protein. (279 aa)    
Predicted Functional Partners:
GCA_000376945_00296
Unannotated protein.
  
 
 0.981
GCA_000376945_01989
Unannotated protein.
  
 0.961
GCA_000376945_00280
Unannotated protein.
  
 
 0.929
GCA_000376945_03504
Unannotated protein.
    
 0.922
GCA_000376945_00193
Unannotated protein.
   
 
 0.911
GCA_000376945_00279
Unannotated protein.
   
 
 0.907
GCA_000376945_02935
Unannotated protein.
    
  0.906
GCA_000376945_02814
Unannotated protein.
     
 0.905
GCA_000376945_00428
Unannotated protein.
  
 0.815
GCA_000376945_00232
Unannotated protein.
    
 0.803
Your Current Organism:
Leeia oryzae
NCBI taxonomy Id: 1122158
Other names: L. oryzae DSM 17879, Leeia oryzae DSM 17879
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.