STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ42596.1Octaheme c-type cytochrome, tetrathionate reductase family. (464 aa)    
Predicted Functional Partners:
nuoB
NADH dehydrogenase subunit B /NADH dehydrogenase subunit C /NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. In the C-terminal section; be [...]
   
   0.904
SHJ88897.1
Thiosulfate reductase cytochrome b subunit.
 
     0.766
SHJ51059.1
Thiosulfate reductase cytochrome b subunit.
 
     0.765
SHI98707.1
NADH dehydrogenase subunit M.
    
 
 0.743
SHJ22384.1
NADH dehydrogenase subunit M.
    
 
 0.743
SHJ11352.1
FHA domain-containing protein.
    
  0.728
SHJ11844.1
Hypothetical protein.
    
  0.728
SHI78988.1
Sulfate permease, SulP family.
    
   0.717
SHJ09904.1
Serine protease.
   
 0.716
SHJ39196.1
Hypothetical protein.
   
 0.716
Your Current Organism:
Malonomonas rubra
NCBI taxonomy Id: 1122189
Other names: M. rubra DSM 5091, Malonomonas rubra DSM 5091
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.