STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA34655.1Membrane carboxypeptidase (penicillin-binding protein). (791 aa)    
Predicted Functional Partners:
SJZ46355.1
DivIVA domain-containing protein.
   
 
 0.915
SJZ85598.1
Hypothetical protein.
    
 
 0.884
SKA34820.1
Cell elongation-specific peptidoglycan D,D-transpeptidase.
  
 
0.859
SKA03386.1
Cell division protein FtsI/penicillin-binding protein 2.
  
 
 0.830
SJZ39004.1
Cell division protein FtsI/penicillin-binding protein 2.
  
 
0.800
SJZ46549.1
Cell division-specific peptidoglycan biosynthesis regulator FtsW; Belongs to the SEDS family.
  
 
 
 0.791
mltG
UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
  
   
 0.779
SKA29960.1
Penicillin-binding protein 2.
  
 
 0.775
SJZ46645.1
Peptidoglycan synthetase FtsI.
  
 
0.724
SKA29953.1
Rod shape determining protein RodA; Belongs to the SEDS family.
  
 
 
 0.700
Your Current Organism:
Marinactinospora thermotolerans
NCBI taxonomy Id: 1122192
Other names: M. thermotolerans DSM 45154, Marinactinospora thermotolerans DSM 45154
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