STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW63337.1Hypothetical protein; Partial gene; manually curated. (31 aa)    
Predicted Functional Partners:
SDW54347.1
Urea carboxylase.
   
 
 0.775
SDW15770.1
Glutamate synthase (NADH) large subunit.
  
 
 0.772
SDW17823.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.753
SDW08394.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.729
SDW69710.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.728
SDW95052.1
Glycine/D-amino acid oxidase.
  
 0.691
SDW08101.1
PTS system sucrose-specific IIB component, Glc family /PTS system sucrose-specific IIC component, Glc family.
   
 
 0.682
SDW54683.1
PTS system beta-glucoside-specific IIA component, Glc family /PTS system beta-glucoside-specific IIB component, Glc family /PTS system beta-glucoside-specific IIC component, Glc family.
   
 
 0.682
SDW65350.1
PTS system D-glucose-specific IIA component, Glc family /PTS system D-glucose-specific IIB component, Glc family /PTS system D-glucose-specific IIC component, Glc family.
   
 
 0.682
SDW88426.1
PTS system trehalose-specific IIB component, Glc family /PTS system trehalose-specific IIC component, Glc family.
   
 
 0.682
Your Current Organism:
Marinococcus luteus
NCBI taxonomy Id: 1122204
Other names: CCTCC AA 208014, DSM 23126, KCTC 13214, M. luteus, Marinococcus luteus Wang et al. 2009, YIM 91094
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.