STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422365_01090Unannotated protein. (421 aa)    
Predicted Functional Partners:
GCA_000422365_01091
Unannotated protein.
 
     0.897
GCA_000422365_01089
Unannotated protein.
 
    0.785
GCA_000422365_00302
Unannotated protein.
  
     0.768
GCA_000422365_01092
Unannotated protein.
       0.551
GCA_000422365_00256
Unannotated protein.
    
  0.547
GCA_000422365_01093
Unannotated protein.
  
     0.538
GCA_000422365_01822
Unannotated protein.
  
  
  0.474
GCA_000422365_00024
Unannotated protein.
  
    0.451
GCA_000422365_02663
Unannotated protein.
  
     0.449
GCA_000422365_00030
Unannotated protein.
  
     0.435
Your Current Organism:
Mesoflavibacter zeaxanthinifaciens DSM 18436
NCBI taxonomy Id: 1122225
Other names: Flavobacteriaceae bacterium TD-ZX30, M. zeaxanthinifaciens DSM 18436, Mesoflavibacter zeaxanthinifaciens NBRC 102119, Mesoflavibacter zeaxanthinifaciens TD-ZX30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.