Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
argG | asnB | GCA_000711905_00285 | GCA_000711905_00844 | Argininosuccinate synthase. | Asparagine synthetase B [glutamine-hydrolyzing]. | 0.998 |
argG | aspC_1 | GCA_000711905_00285 | GCA_000711905_00129 | Argininosuccinate synthase. | Aspartate aminotransferase. | 0.801 |
argG | cfiB | GCA_000711905_00285 | GCA_000711905_01330 | Argininosuccinate synthase. | 2-oxoglutarate carboxylase small subunit. | 0.674 |
argG | purA | GCA_000711905_00285 | GCA_000711905_00734 | Argininosuccinate synthase. | Adenylosuccinate synthetase. | 0.850 |
argG | thrA | GCA_000711905_00285 | GCA_000711905_01584 | Argininosuccinate synthase. | Bifunctional aspartokinase/homoserine dehydrogenase 1. | 0.888 |
asnB | argG | GCA_000711905_00844 | GCA_000711905_00285 | Asparagine synthetase B [glutamine-hydrolyzing]. | Argininosuccinate synthase. | 0.998 |
asnB | aspC_1 | GCA_000711905_00844 | GCA_000711905_00129 | Asparagine synthetase B [glutamine-hydrolyzing]. | Aspartate aminotransferase. | 0.944 |
asnB | cfiB | GCA_000711905_00844 | GCA_000711905_01330 | Asparagine synthetase B [glutamine-hydrolyzing]. | 2-oxoglutarate carboxylase small subunit. | 0.916 |
asnB | gltA | GCA_000711905_00844 | GCA_000711905_01233 | Asparagine synthetase B [glutamine-hydrolyzing]. | Citrate synthase. | 0.416 |
asnB | hisC | GCA_000711905_00844 | GCA_000711905_00867 | Asparagine synthetase B [glutamine-hydrolyzing]. | Histidinol-phosphate aminotransferase. | 0.610 |
asnB | mdh | GCA_000711905_00844 | GCA_000711905_01363 | Asparagine synthetase B [glutamine-hydrolyzing]. | Malate dehydrogenase. | 0.595 |
asnB | purA | GCA_000711905_00844 | GCA_000711905_00734 | Asparagine synthetase B [glutamine-hydrolyzing]. | Adenylosuccinate synthetase. | 0.999 |
asnB | thrA | GCA_000711905_00844 | GCA_000711905_01584 | Asparagine synthetase B [glutamine-hydrolyzing]. | Bifunctional aspartokinase/homoserine dehydrogenase 1. | 0.999 |
aspC_1 | argG | GCA_000711905_00129 | GCA_000711905_00285 | Aspartate aminotransferase. | Argininosuccinate synthase. | 0.801 |
aspC_1 | asnB | GCA_000711905_00129 | GCA_000711905_00844 | Aspartate aminotransferase. | Asparagine synthetase B [glutamine-hydrolyzing]. | 0.944 |
aspC_1 | cfiB | GCA_000711905_00129 | GCA_000711905_01330 | Aspartate aminotransferase. | 2-oxoglutarate carboxylase small subunit. | 0.774 |
aspC_1 | coaBC | GCA_000711905_00129 | GCA_000711905_00460 | Aspartate aminotransferase. | Coenzyme A biosynthesis bifunctional protein CoaBC. | 0.787 |
aspC_1 | gltA | GCA_000711905_00129 | GCA_000711905_01233 | Aspartate aminotransferase. | Citrate synthase. | 0.805 |
aspC_1 | hisC | GCA_000711905_00129 | GCA_000711905_00867 | Aspartate aminotransferase. | Histidinol-phosphate aminotransferase. | 0.798 |
aspC_1 | mdh | GCA_000711905_00129 | GCA_000711905_01363 | Aspartate aminotransferase. | Malate dehydrogenase. | 0.796 |
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