STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aspC_1Aspartate aminotransferase. (373 aa)    
Predicted Functional Partners:
asnB
Asparagine synthetase B [glutamine-hydrolyzing].
  
 
 0.944
pheA_1
P-protein.
 
 
 0.844
gltA
Citrate synthase.
  
 0.805
thrA
Bifunctional aspartokinase/homoserine dehydrogenase 1.
  
 0.805
argG
Argininosuccinate synthase.
  
 0.801
hisC
Histidinol-phosphate aminotransferase.
 
 
0.798
mdh
Malate dehydrogenase.
  
 0.796
coaBC
Coenzyme A biosynthesis bifunctional protein CoaBC.
  
  0.787
cfiB
2-oxoglutarate carboxylase small subunit.
  
 
 0.774
purA
Adenylosuccinate synthetase.
  
 0.765
Your Current Organism:
Methermicoccus shengliensis
NCBI taxonomy Id: 1122233
Other names: M. shengliensis DSM 18856, Methermicoccus shengliensis DSM 18856
Server load: low (18%) [HD]