Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DNPH1_2 | GCA_000711905_01149 | GCA_000711905_01152 | GCA_000711905_01149 | 2'-deoxynucleoside 5'-phosphate N-hydrolase 1. | Hypothetical protein. | 0.773 |
DNPH1_2 | pyrE_2 | GCA_000711905_01152 | GCA_000711905_01148 | 2'-deoxynucleoside 5'-phosphate N-hydrolase 1. | Orotate phosphoribosyltransferase. | 0.681 |
DNPH1_2 | ydcP | GCA_000711905_01152 | GCA_000711905_01151 | 2'-deoxynucleoside 5'-phosphate N-hydrolase 1. | Putative protease YdcP. | 0.814 |
DNPH1_2 | ypdF | GCA_000711905_01152 | GCA_000711905_01150 | 2'-deoxynucleoside 5'-phosphate N-hydrolase 1. | Aminopeptidase YpdF. | 0.773 |
GCA_000711905_01149 | DNPH1_2 | GCA_000711905_01149 | GCA_000711905_01152 | Hypothetical protein. | 2'-deoxynucleoside 5'-phosphate N-hydrolase 1. | 0.773 |
GCA_000711905_01149 | pyrE_2 | GCA_000711905_01149 | GCA_000711905_01148 | Hypothetical protein. | Orotate phosphoribosyltransferase. | 0.691 |
GCA_000711905_01149 | ydcP | GCA_000711905_01149 | GCA_000711905_01151 | Hypothetical protein. | Putative protease YdcP. | 0.778 |
GCA_000711905_01149 | ypdF | GCA_000711905_01149 | GCA_000711905_01150 | Hypothetical protein. | Aminopeptidase YpdF. | 0.777 |
GCA_000711905_01528 | hddC | GCA_000711905_01528 | GCA_000711905_01428 | Hypothetical protein. | D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase. | 0.469 |
GCA_000711905_01528 | ypdF | GCA_000711905_01528 | GCA_000711905_01150 | Hypothetical protein. | Aminopeptidase YpdF. | 0.753 |
aroC | ydcP | GCA_000711905_00231 | GCA_000711905_01151 | Chorismate synthase. | Putative protease YdcP. | 0.454 |
aroC | ypdF | GCA_000711905_00231 | GCA_000711905_01150 | Chorismate synthase. | Aminopeptidase YpdF. | 0.687 |
dpp5 | ypdF | GCA_000711905_01257 | GCA_000711905_01150 | Dipeptidyl-peptidase 5. | Aminopeptidase YpdF. | 0.801 |
hddC | GCA_000711905_01528 | GCA_000711905_01428 | GCA_000711905_01528 | D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase. | Hypothetical protein. | 0.469 |
hddC | trxB | GCA_000711905_01428 | GCA_000711905_01161 | D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase. | Thioredoxin reductase. | 0.508 |
hddC | ypdF | GCA_000711905_01428 | GCA_000711905_01150 | D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase. | Aminopeptidase YpdF. | 0.838 |
map | ypdF | GCA_000711905_00827 | GCA_000711905_01150 | Methionine aminopeptidase. | Aminopeptidase YpdF. | 0.702 |
pyrE_2 | DNPH1_2 | GCA_000711905_01148 | GCA_000711905_01152 | Orotate phosphoribosyltransferase. | 2'-deoxynucleoside 5'-phosphate N-hydrolase 1. | 0.681 |
pyrE_2 | GCA_000711905_01149 | GCA_000711905_01148 | GCA_000711905_01149 | Orotate phosphoribosyltransferase. | Hypothetical protein. | 0.691 |
pyrE_2 | ydcP | GCA_000711905_01148 | GCA_000711905_01151 | Orotate phosphoribosyltransferase. | Putative protease YdcP. | 0.708 |
page 1 of 2