STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gabTUnannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (446 aa)    
Predicted Functional Partners:
gadB
Unannotated protein; Belongs to the group II decarboxylase family.
  
 0.951
sad
Unannotated protein; Belongs to the aldehyde dehydrogenase family.
  
 0.942
mmsA
Unannotated protein.
  
 0.942
yajC
Unannotated protein.
     
 0.935
fadJ
Unannotated protein.
  
 0.924
panD
Unannotated protein; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
    
 0.908
panC
Unannotated protein; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
     
 0.906
GarR_2
Unannotated protein.
    
  0.901
mmsB
Unannotated protein; Belongs to the HIBADH-related family.
    
  0.901
Prr_2
Unannotated protein; Belongs to the aldehyde dehydrogenase family.
 
 0.898
Your Current Organism:
Mycolicibacterium hassiacum
NCBI taxonomy Id: 1122247
Other names: M. hassiacum DSM 44199, Mycobacterium hassiacum DSM 44199, Mycolicibacterium hassiacum DSM 44199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.