Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GarR_2 | fadJ | GCA_000379865_00698 | GCA_000379865_02836 | Unannotated protein. | Unannotated protein. | 0.931 |
GarR_2 | gabT | GCA_000379865_00698 | GCA_000379865_00031 | Unannotated protein. | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.901 |
GarR_2 | mmsA | GCA_000379865_00698 | GCA_000379865_03964 | Unannotated protein. | Unannotated protein. | 0.924 |
GarR_2 | mmsB | GCA_000379865_00698 | GCA_000379865_03962 | Unannotated protein. | Unannotated protein; Belongs to the HIBADH-related family. | 0.924 |
Prr_2 | gabT | GCA_000379865_00030 | GCA_000379865_00031 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.898 |
fadJ | GarR_2 | GCA_000379865_02836 | GCA_000379865_00698 | Unannotated protein. | Unannotated protein. | 0.931 |
fadJ | gabT | GCA_000379865_02836 | GCA_000379865_00031 | Unannotated protein. | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.924 |
fadJ | mmsA | GCA_000379865_02836 | GCA_000379865_03964 | Unannotated protein. | Unannotated protein. | 0.932 |
fadJ | mmsB | GCA_000379865_02836 | GCA_000379865_03962 | Unannotated protein. | Unannotated protein; Belongs to the HIBADH-related family. | 0.931 |
gabT | GarR_2 | GCA_000379865_00031 | GCA_000379865_00698 | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Unannotated protein. | 0.901 |
gabT | Prr_2 | GCA_000379865_00031 | GCA_000379865_00030 | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | 0.898 |
gabT | fadJ | GCA_000379865_00031 | GCA_000379865_02836 | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Unannotated protein. | 0.924 |
gabT | gadB | GCA_000379865_00031 | GCA_000379865_03025 | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Unannotated protein; Belongs to the group II decarboxylase family. | 0.951 |
gabT | mmsA | GCA_000379865_00031 | GCA_000379865_03964 | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Unannotated protein. | 0.942 |
gabT | mmsB | GCA_000379865_00031 | GCA_000379865_03962 | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Unannotated protein; Belongs to the HIBADH-related family. | 0.901 |
gabT | panC | GCA_000379865_00031 | GCA_000379865_01727 | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Unannotated protein; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.906 |
gabT | panD | GCA_000379865_00031 | GCA_000379865_01726 | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Unannotated protein; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.908 |
gabT | sad | GCA_000379865_00031 | GCA_000379865_00942 | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | 0.942 |
gabT | yajC | GCA_000379865_00031 | GCA_000379865_00032 | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Unannotated protein. | 0.935 |
gadB | gabT | GCA_000379865_03025 | GCA_000379865_00031 | Unannotated protein; Belongs to the group II decarboxylase family. | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.951 |
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