STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426505_00058Unannotated protein. (471 aa)    
Predicted Functional Partners:
GCA_000426505_02138
Unannotated protein.
 
0.992
GCA_000426505_03135
Unannotated protein.
 
 0.992
GCA_000426505_01163
Unannotated protein.
 
0.990
GCA_000426505_02760
Unannotated protein.
 
0.989
GCA_000426505_00661
Unannotated protein.
    
 0.980
GCA_000426505_00840
Unannotated protein.
 
0.979
GCA_000426505_00217
Unannotated protein.
 
0.978
GCA_000426505_00057
Unannotated protein.
 0.977
GCA_000426505_02107
Unannotated protein.
 0.969
GCA_000426505_02247
Unannotated protein.
 0.927
Your Current Organism:
Nisaea denitrificans
NCBI taxonomy Id: 1122607
Other names: N. denitrificans DSM 18348, Nisaea denitrificans DR41_21, Nisaea denitrificans DSM 18348
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