STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426505_01587Unannotated protein. (307 aa)    
Predicted Functional Partners:
GCA_000426505_00033
Unannotated protein.
  
     0.733
GCA_000426505_01319
Unannotated protein.
  
     0.661
GCA_000426505_03040
Unannotated protein.
  
     0.659
GCA_000426505_03773
Unannotated protein.
  
     0.635
GCA_000426505_01604
Unannotated protein.
  
     0.623
GCA_000426505_00667
Unannotated protein.
  
     0.621
GCA_000426505_00008
Unannotated protein.
  
     0.496
GCA_000426505_01588
Unannotated protein.
       0.494
GCA_000426505_03749
Unannotated protein.
  
     0.480
GCA_000426505_01891
Unannotated protein.
     
 0.405
Your Current Organism:
Nisaea denitrificans
NCBI taxonomy Id: 1122607
Other names: N. denitrificans DSM 18348, Nisaea denitrificans DR41_21, Nisaea denitrificans DSM 18348
Server load: low (10%) [HD]