STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426505_03873Unannotated protein. (375 aa)    
Predicted Functional Partners:
GCA_000426505_00161
Unannotated protein.
      0.897
GCA_000426505_01891
Unannotated protein.
  
 
 0.792
GCA_000426505_03872
Unannotated protein.
 
     0.742
GCA_000426505_01627
Unannotated protein.
  
  
  0.712
GCA_000426505_01225
Unannotated protein.
    
 0.698
GCA_000426505_01890
Unannotated protein.
  
  
 0.664
GCA_000426505_00978
Unannotated protein.
    
 0.652
GCA_000426505_04169
Unannotated protein.
  
     0.517
GCA_000426505_01971
Unannotated protein.
  
  
  0.493
GCA_000426505_03882
Unannotated protein.
  
  
 0.493
Your Current Organism:
Nisaea denitrificans
NCBI taxonomy Id: 1122607
Other names: N. denitrificans DSM 18348, Nisaea denitrificans DR41_21, Nisaea denitrificans DSM 18348
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.