STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426505_03925Unannotated protein. (347 aa)    
Predicted Functional Partners:
GCA_000426505_00764
Unannotated protein.
 
0.850
GCA_000426505_03924
Unannotated protein.
       0.759
GCA_000426505_03783
Unannotated protein.
   
   0.661
GCA_000426505_03926
Unannotated protein.
       0.647
GCA_000426505_03001
Unannotated protein.
    
 0.642
GCA_000426505_00658
Unannotated protein.
   
 
 0.613
GCA_000426505_02474
Unannotated protein.
    
   0.591
GCA_000426505_02475
Unannotated protein.
    
   0.591
GCA_000426505_02402
Unannotated protein.
   
   0.587
GCA_000426505_01891
Unannotated protein.
     
 0.572
Your Current Organism:
Nisaea denitrificans
NCBI taxonomy Id: 1122607
Other names: N. denitrificans DSM 18348, Nisaea denitrificans DR41_21, Nisaea denitrificans DSM 18348
Server load: low (6%) [HD]