STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000427965_03786Unannotated protein. (179 aa)    
Predicted Functional Partners:
GCA_000427965_02405
Unannotated protein.
  
  
 
0.947
GCA_000427965_03202
Unannotated protein.
  
 0.747
GCA_000427965_00202
Unannotated protein.
   
  0.639
GCA_000427965_00506
Unannotated protein.
   
  0.639
GCA_000427965_01197
Unannotated protein.
   
  0.639
GCA_000427965_01981
Unannotated protein.
   
  0.639
GCA_000427965_03528
Unannotated protein.
   
  0.639
GCA_000427965_03053
Unannotated protein.
  
  
 
0.638
GCA_000427965_01334
Unannotated protein.
   
  0.627
GCA_000427965_01936
Unannotated protein.
   
  0.627
Your Current Organism:
Olivibacter sitiensis
NCBI taxonomy Id: 1122621
Other names: O. sitiensis DSM 17696, Olivibacter sitiensis DSM 17696
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.