STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421185_00920Unannotated protein. (495 aa)    
Predicted Functional Partners:
GCA_000421185_00919
Unannotated protein.
    
 0.842
xylA
Unannotated protein; Belongs to the xylose isomerase family.
  
 
 0.831
GCA_000421185_02644
Unannotated protein.
  
 
 0.825
GCA_000421185_03344
Unannotated protein.
 
  
  0.811
GCA_000421185_02405
Unannotated protein.
     
 0.800
GCA_000421185_02182
Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.797
GCA_000421185_00918
Unannotated protein.
     
 0.793
GCA_000421185_00916
Unannotated protein.
  
    0.775
GCA_000421185_00917
Unannotated protein.
       0.773
GCA_000421185_00912
Unannotated protein; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
    
 0.770
Your Current Organism:
Ornithinimicrobium pekingense
NCBI taxonomy Id: 1122622
Other names: O. pekingense DSM 21552, Ornithinimicrobium pekingense DSM 21552, Ornithinimicrobium pekingense LW6, Ornithinimicrobium pekingense str. DSM 21552, Ornithinimicrobium pekingense strain DSM 21552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.