STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374845_02108Unannotated protein. (282 aa)    
Predicted Functional Partners:
GCA_000374845_03481
Unannotated protein.
 
      0.702
GCA_000374845_00281
Unannotated protein.
 
 
  0.689
GCA_000374845_02107
Unannotated protein.
       0.492
GCA_000374845_00800
Unannotated protein.
  
 
  0.485
GCA_000374845_01724
Unannotated protein.
  
 
  0.485
GCA_000374845_01776
Unannotated protein.
  
 
  0.455
GCA_000374845_02118
Unannotated protein.
  
 
  0.455
GCA_000374845_00595
Unannotated protein.
  
 
  0.450
GCA_000374845_02355
Unannotated protein.
    
 0.418
Your Current Organism:
Paenibacillus terrigena
NCBI taxonomy Id: 1122927
Other names: P. terrigena DSM 21567, Paenibacillus terrigena DSM 21567
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.